PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dca1501.1

Organism

Dianthus caryophyllus

Taxonomic ID

3570

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus

Family

VOZ

Protein Properties

Length: 529aa MW: 59161.9 Da PI: 5.9492

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dca1501.1	genome	DCA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	356.3	1.2e-109	271	499	2	217
VOZ 2 ppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelfdlsll 101 +psaflgpkcalwdc+rpaqgse +++ycssfha+la +e pgt pvlrp+gi+lkdg+l+ al++k++gk+vgipec gaa++kspwna++lfd+s+l Dca1501.1 271 QPSAFLGPKCALWDCARPAQGSEICNNYCSSFHAELARKECGPGTGPVLRPGGIGLKDGPLILALRCKIEGKDVGIPECPGAASTKSPWNAPDLFDISIL 370 69************************************************************************************************ PP VOZ 102 egetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekksakgkvs 201 ege irewlffdkprrafe+g rkqrslpd++grgwhesrk ++e+gg+krsyy dpqp++ f+whlyeye+++++a+alyrlelk + ekks+k kv+ Dca1501.1 371 EGEKIREWLFFDKPRRAFETGTRKQRSLPDHEGRGWHESRKLPLNEYGGRKRSYYADPQPQKDFDWHLYEYEVDNCEAYALYRLELKAAGEKKSPKLKVA 470 *****************************************************************************************999999987 PP VOZ 202 k.............dsladlqkklgrlta 217 + d+l dlqk++ rlta Dca1501.1 471 EdkkkkspntksptDPLLDLQKQMHRLTA 499 51122222222222678899999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence Send to blast
MMGKSSKNAA TPSHQTLKGQ AKNRVQHLQL MLNELQLARK QSRDGDIAKL EEQVNEVLRE 60 WKTELDEPTP ASSLHGESLG SLEQFNSILQ YIDIADDATS PLAGPPAMML GNENGHGHVH 120 LTNELGVTDR SGDKEAYYLN HSPEQHEFQR LQSDMHVPQQ QEFQGFVNHL SPHHGFQGFE 180 NHSLEQHDFQ RFEHCNGTSD VQGTMINNFG ASGLNNSVDS NLNMNNQLNY LDSDVHHNFD 240 NEVFLSATDI GQWGLDDLAD FSDVLPNVNL QPSAFLGPKC ALWDCARPAQ GSEICNNYCS 300 SFHAELARKE CGPGTGPVLR PGGIGLKDGP LILALRCKIE GKDVGIPECP GAASTKSPWN 360 APDLFDISIL EGEKIREWLF FDKPRRAFET GTRKQRSLPD HEGRGWHESR KLPLNEYGGR 420 KRSYYADPQP QKDFDWHLYE YEVDNCEAYA LYRLELKAAG EKKSPKLKVA EDKKKKSPNT 480 KSPTDPLLDL QKQMHRLTAV VSTDEKPSGL KARSDLTSNI VNVQDSCSK

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence Send to blast

MMGKSSKNAA TPSHQTLKGQ AKNRVQHLQL MLNELQLARK QSRDGDIAKL EEQVNEVLRE  60
WKTELDEPTP ASSLHGESLG SLEQFNSILQ YIDIADDATS PLAGPPAMML GNENGHGHVH  120
LTNELGVTDR SGDKEAYYLN HSPEQHEFQR LQSDMHVPQQ QEFQGFVNHL SPHHGFQGFE  180
NHSLEQHDFQ RFEHCNGTSD VQGTMINNFG ASGLNNSVDS NLNMNNQLNY LDSDVHHNFD  240
NEVFLSATDI GQWGLDDLAD FSDVLPNVNL QPSAFLGPKC ALWDCARPAQ GSEICNNYCS  300
SFHAELARKE CGPGTGPVLR PGGIGLKDGP LILALRCKIE GKDVGIPECP GAASTKSPWN  360
APDLFDISIL EGEKIREWLF FDKPRRAFET GTRKQRSLPD HEGRGWHESR KLPLNEYGGR  420
KRSYYADPQP QKDFDWHLYE YEVDNCEAYA LYRLELKAAG EKKSPKLKVA EDKKKKSPNT  480
KSPTDPLLDL QKQMHRLTAV VSTDEKPSGL KARSDLTSNI VNVQDSCSK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010689762.1	0.0	PREDICTED: transcription factor VOZ1
TrEMBL	A0A0K9S044	0.0	A0A0K9S044_SPIOL; Uncharacterized protein
STRING	XP_010689762.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42400.1	1e-106	vascular plant one zinc finger protein 2