PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca16861.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 171aa    MW: 18992.1 Da    PI: 4.7881
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca16861.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.13.8e-133188461
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61
                 ++ +r+++NRe+ArrsR RK++ +e L+ ++  L+ eN++  ++++  +++  ++++
  Dca16861.1 31 ERKRKRMESNRESARRSRMRKQQLVEDLTAEISRLKIENHKVGETINVTNQQLMNVEA 88
                56889************************************99999988887766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.6E-112484No hitNo description
SMARTSM003381.2E-142892IPR004827Basic-leucine zipper domain
PfamPF001703.5E-103082IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.2893093IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.33E-113285No hitNo description
CDDcd147025.64E-193384No hitNo description
PROSITE patternPS0003603550IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    Send to blast
MATLSGNTTT ISSSASEGNG NAATPTTMAE ERKRKRMESN RESARRSRMR KQQLVEDLTA  60
EISRLKIENH KVGETINVTN QQLMNVEADN SVLRAQMNEL SQRLDSLNAI INDINTLGGL  120
GFFQEDLGVM QGYFGNFIND DINVVCNNNN NSWNSGFLNQ PIMASADVLQ Y
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14451RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021759924.13e-49bZIP transcription factor 11-like
TrEMBLA0A0K9REL17e-46A0A0K9REL1_SPIOL; Uncharacterized protein
STRINGXP_010672920.11e-47(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34590.18e-30G-box binding factor 6