PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dca1842.1

Organism

Dianthus caryophyllus

Taxonomic ID

3570

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus

Family

bZIP

Protein Properties

Length: 161aa MW: 18141.5 Da PI: 8.1876

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dca1842.1	genome	DCA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.4	9.7e-16	29	88	5	64
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 k+ rr+++NRe+ArrsRq+K++ ++ L + v +L eN +L k++ee + + a++++++e Dca1842.1 29 KKRRRMESNRESARRSRQKKQQHLDGLIKQVGSLMRENGELEKKIEEFTALFAAMDAKNE 88 899***************************************************999985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	7.4E-17	25	89	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.8E-14	26	78	No hit	No description
PROSITE profile	PS50217	11.162	27	90	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	8.13E-13	29	81	No hit	No description
Pfam	PF00170	4.7E-12	29	87	IPR004827	Basic-leucine zipper domain
CDD	cd14702	2.18E-16	30	75	No hit	No description
PROSITE pattern	PS00036	0	32	47	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 161 aa Download sequence Send to blast
MTFSINYDAF QGNAKPSKSS ASEGCVDEKK RRRMESNRES ARRSRQKKQQ HLDGLIKQVG 60 SLMRENGELE KKIEEFTALF AAMDAKNEVL KAEKNRLVAK LDALENIIET ATAVKGSSSS 120 SESGEMLYEV SDDLMMKPWK LPRYSLPIAA SSGFRCYDFD D

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	41	47	RRSRQKK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010671685.1	3e-45	PREDICTED: bZIP transcription factor 53
STRING	XP_010671685.1	1e-44	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	5e-21	basic leucine-zipper 44