PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca23162.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family BES1
Protein Properties Length: 327aa    MW: 35276.4 Da    PI: 9.4569
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca23162.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF8222038.7e-6321491149
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 
                 +gsgr+ptw+ErEnnkrRERrRRa+aakiyaGLR++Gny+lpk++DnneVlkAL+r+AGw+vedDGttyrkg+kp e ++++g sas+sp+ss+     
  Dca23162.1   2 TGSGRMPTWRERENNKRRERRRRAVAAKIYAGLRMYGNYRLPKHCDNNEVLKALARDAGWIVEDDGTTYRKGCKPVEPMDIIGGSASVSPCSSYP---- 96 
                 689********************************************************************************************.... PP

      DUF822 100 ssalaspvesysaspksssfpspssldsislasa.....asllpvlsvlslvsss 149
                     +   +sy++sp+sssfpsp+++  +++  +     +sl+p+l++ls++ ss
  Dca23162.1  97 --VSPRAGASYNPSPASSSFPSPARSYYAPNLVNgttdpNSLIPWLKNLSSSGSS 149
                 ..44556789*************9977665544446677*********9985544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.7E-633144IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MTGSGRMPTW RERENNKRRE RRRRAVAAKI YAGLRMYGNY RLPKHCDNNE VLKALARDAG  60
WIVEDDGTTY RKGCKPVEPM DIIGGSASVS PCSSYPVSPR AGASYNPSPA SSSFPSPARS  120
YYAPNLVNGT TDPNSLIPWL KNLSSSGSSS TSPKLPYIHI PGYSISAPVT PPLSSPTCRT  180
PRAKNDWDDN NVAPPWANPL NYSLPSSTPH SPGRKQQPPR GWLANIPNGP TSPTFSLVSS  240
NPFASKDEVM AGGGSRMWTP GQSGTSSPVV TTSFDRTADV PMSDGISAEF AFGNGMTGLV  300
KAWEGERIHE ECTPDDLELT LGSSKTR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A5e-23687372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B5e-23687372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C5e-23687372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D5e-23687372452Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010665681.11e-164PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-106BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A0J8B9H31e-163A0A0J8B9H3_BETVU; Uncharacterized protein
STRINGXP_010665681.11e-164(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-87BES1/BZR1 homolog 4