PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dca32558.1

Organism

Dianthus caryophyllus

Taxonomic ID

3570

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus

Family

G2-like

Protein Properties

Length: 206aa MW: 23541.6 Da PI: 7.3807

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dca32558.1	genome	DCA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	47.8	3.2e-15	6	35	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +A+Pk+ilelm+v+gLt+e+v+SHLQkYR Dca32558.1 6 EAVPKKILELMNVPGLTRENVASHLQKYRQ 35 69***************************5 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
TIGRFAMs	TIGR01557	4.1E-13	6	35	IPR006447	Myb domain, plants
Gene3D	G3DSA:1.10.10.60	8.7E-14	6	38	IPR009057	Homeodomain-like
SuperFamily	SSF46689	1.43E-7	7	38	IPR009057	Homeodomain-like

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence Send to blast
MVVNVEAVPK KILELMNVPG LTRENVASHL QKYRQCHKQL ERPFLQKRGN KVKLIPLQEQ 60 SHISISPTNG HPNIQTQTQV ISTSSLQVRS FPTQIDLYGN HETLKHMTHA MKIQAMSNES 120 MVFGENSSSK TDMNMAIVKH VEGSNVIYHP WSTTFSREDN VNKEATSFFA REQCVNYGYG 180 YENLLDLGYN DAPFCFEQID HNSYAH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	2e-12	response regulator 1