PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca33646.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 319aa    MW: 35621 Da    PI: 4.3206
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca33646.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.21.5e-07158201346
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                  +k+ +r  kNR AA rsR+RKk+ ++eLe k+  +e+e ++L 
  Dca33646.1 158 LSKKRKRQLKNRDAAMRSRERKKKFVKELEMKSRYFEEECRRLG 201
                 57999*********************************998764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0037153220IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.8E-10154215No hitNo description
PROSITE profilePS502179.599158221IPR004827Basic-leucine zipper domain
PfamPF077161.9E-6159200IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.46E-9160216No hitNo description
CDDcd147043.62E-11161212No hitNo description
PROSITE patternPS000360163178IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MTTNTDEIDW ENILNFDDGV DNFDCFTAVG SPPEKAAVDT VVAELEDILM KDDDDDNGGV  60
SDDDYFRDFD FEVSDLLLDI PEIGGEPLSV EVEVVNTVVE DKNSPVSSAS VGNVVVEGGG  120
GGGVIGGLNY QENSPNFESN CEDDKSGDGD GDDDDDPLSK KRKRQLKNRD AAMRSRERKK  180
KFVKELEMKS RYFEEECRRL GRLLNWCYAE NQMLRISLHT YGAPMTNPES AVLSLESLLL  240
GSLVWLMVNI CLLPQPKLPL LNQCAAKLVS VDRNVLENAT PRGKGTRISE PWIFLSFMRS  300
RRCRASRTKM KPRSDVCVF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160180KRKRQLKNRDAAMRSRERKKK
2161180RKRQLKNRDAAMRSRERKKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010684737.11e-62PREDICTED: bZIP transcription factor 60
TrEMBLA0A0K9QFM62e-60A0A0K9QFM6_SPIOL; Uncharacterized protein
STRINGXP_010684737.15e-62(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.15e-11basic region/leucine zipper motif 60