PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca35024.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 161aa    MW: 18374 Da    PI: 7.7041
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca35024.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.16.2e-162786463
                XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                 k+ +r+q+NRe+ArrsR+RK++ i+ L+  v +L++ N + ++++++ ++++ +++se+
  Dca35024.1 27 EKKRKRMQSNRESARRSRLRKQKHIDDLTAQVVSLKNANAQIQDNIKTTNEHYVEVESEN 86
                5999*************************************************9999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.3E-121878No hitNo description
SMARTSM003384.9E-172488IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.2892689IPR004827Basic-leucine zipper domain
PfamPF001702.9E-142886IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.0E-112880No hitNo description
CDDcd147027.54E-172979No hitNo description
PROSITE patternPS0003603146IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MATTTTTTTT SSGTSSQNQN TKYDDNEKKR KRMQSNRESA RRSRLRKQKH IDDLTAQVVS  60
LKNANAQIQD NIKTTNEHYV EVESENAVLR VQLFELTQRL NSLNEINHVL SSNNNNNNNV  120
DYDDQGLGSY YVQGHFGNNN NAWNCVNHHP IMASADNMFH C
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14046RRSRLRK
24047RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011083621.19e-38bZIP transcription factor 44
RefseqXP_019174549.17e-38PREDICTED: bZIP transcription factor 44-like
TrEMBLA0A0J8FKP26e-36A0A0J8FKP2_BETVU; Uncharacterized protein
TrEMBLA0A3Q8TAZ83e-36A0A3Q8TAZ8_DIOKA; Transcription factor bZIP7
STRINGXP_010671337.11e-36(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.11e-34basic leucine-zipper 44