PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca3627.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 325aa    MW: 35389.5 Da    PI: 5.5172
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca3627.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.12.3e-14243301360
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHHHHHHHH CS
     bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkkevaklk 60 
                + +r+rr++kNRe+A rsR+RK+a++ eLe  +++Le+eN++L ++++++ k+ + +l 
  Dca3627.1 243 AQQRQRRMIKNRESAARSRERKQAYQIELEALAAKLEEENEQLlREKAQRTKQRYMQLM 301
                679**************************************963788999999888775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.0E-12240295No hitNo description
SMARTSM003382.8E-10241305IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.737243295IPR004827Basic-leucine zipper domain
PfamPF001703.4E-12243300IPR004827Basic-leucine zipper domain
CDDcd147075.17E-20245291No hitNo description
SuperFamilySSF579599.38E-10245296No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MPTSSTSTST ISDHSLLPSP SSNTIDFFHL NHSFNPTNNR FHGNNLGNRD RAMPELGNSD  60
AGDVAVSPMN VDGMFSGGGE GNDAMLDAEI TLIDAAGAIS AVDCGGGNGE EMRRRTAEEV  120
WREIVEGGDR RECKVEASEE MMTLEDFLAR ATAGEEDDTV VSAVEESVKM EGSVSGAGMY  180
GFDHQGMVQG VFPMAAVVPP PGFGNGRGGA EVQVTVAHGG GGGGRGKRSR GSGAMMETLD  240
KAAQQRQRRM IKNRESAARS RERKQAYQIE LEALAAKLEE ENEQLLREKA QRTKQRYMQL  300
MEKIVPVVES RRPRRPLRRV RSMQW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018848162.12e-68PREDICTED: G-box-binding factor 4 isoform X1
TrEMBLA0A2R6Q0Y02e-69A0A2R6Q0Y0_ACTCH; G-box-binding factor like
STRINGVIT_18s0072g00470.t015e-66(Vitis vinifera)
STRINGSolyc04g071510.2.16e-66(Solanum lycopersicum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-33bZIP family protein