PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca3648.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 242aa    MW: 28231 Da    PI: 7.9154
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca3648.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1201.5e-06182221645
                HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
     bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                +er ++kNR++A ++ ++ ka i  Le  v +L +eNk  
  Dca3648.1 182 KERQRIKNRISAAECYRKEKAHIRDLEAQVINLRTENKIR 221
                79***********************************844 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579592.88E-6182232No hitNo description
CDDcd146867.46E-7182233No hitNo description
Gene3DG3DSA:1.20.5.1702.6E-7182231No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MLYDFEEFER KFLQPFSSRR WLQKTDTDFI DTISVHDFPE IETSANTSSN FTLPNLVEIP  60
EMPLLLDDLS PFDPQVLGWI NFDVTVCPQV EADTTCYIDK ADVEYGEVLA VKPKVAENSR  120
ALQEETDRTS GWCFRGSKGD KVCCNGKCWA SVECRWSQPQ TFRRGRRKKG FEPSTEVRKF  180
CKERQRIKNR ISAAECYRKE KAHIRDLEAQ VINLRTENKI RRNMVKFLES GLQLQRRNQS  240
LG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-