PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca46965.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family BES1
Protein Properties Length: 172aa    MW: 19239.8 Da    PI: 10.3453
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca46965.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822128.21e-39331492117
      DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas.aspesslqsslk 99 
                 +s r p++kErE+nk RE+rRR i+ +iy+GLRa+Gny+lp  aDnn+ lkALc eAGw+v++DGt +rk+   +++   +g  ++  s+   ++++++
  Dca46965.1  33 TSLRFPSEKERERNKEREKRRREISRRIYSGLRAHGNYNLPMNADNNDLLKALCDEAGWLVDEDGTLHRKSAAVKTADVNTGMLSQvSSIIPGITLQPQ 131
                 57899******************************************************************9998555555555551555555668899 PP

      DUF822 100 ssalaspvesysaspkss 117
                 s ++ s v++ +++ +  
  Dca46965.1 132 SHYTGSHVSAEESVREDA 149
                 999999988877766554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056873.3E-3536139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MKKKSEQVRA RGCIKDSRRP WVVHRVTKKG VVTSLRFPSE KERERNKERE KRRREISRRI  60
YSGLRAHGNY NLPMNADNND LLKALCDEAG WLVDEDGTLH RKSAAVKTAD VNTGMLSQVS  120
SIIPGITLQP QSHYTGSHVS AEESVREDAA NVKSVGEGSL NLTLSLSLPG YN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-1556102392438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-1556102392438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-1556102392438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-1556102392438Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9QQR43e-57A0A0K9QQR4_SPIOL; Uncharacterized protein
STRINGXP_010677019.12e-57(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.38e-18BES1 family protein