PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca48654.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 331aa    MW: 36502.9 Da    PI: 5.6061
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca48654.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.91.6e-11183232554
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                 kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++  l  
  Dca48654.1 183 KRIKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSPRVAYLDH 232
                 899**********************************9999887766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-14179243IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.806181233IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.84E-12183237No hitNo description
Gene3DG3DSA:1.20.5.1706.2E-14183234No hitNo description
PfamPF001704.3E-10183230IPR004827Basic-leucine zipper domain
CDDcd147034.35E-23184234No hitNo description
PROSITE patternPS000360186201IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MPPLTTAPTT VPPPPSAAPA SWVDEFLDFT SARRGTHRRS MSDSIAFRET PLVEHCRNLH  60
GGGGFDRLDD EQLMSMFSDD FSGGMKGVGP PSSPSDQNSN NDDNDNGNNK VNGNNGEGES  120
QQKIECFPKS EPGEVDESSA CDNNNNAGDN NNNNNQMCIP LSENNAALNN NHSDGDPLNL  180
DPKRIKRILA NRQSAQRSRV RKLQYISELE RSVTSLQTEV SALSPRVAYL DHQRLILNVD  240
NSALKQRIAA LAQDKIFKDA HQEALKKEIE RLRQIYHHQQ QQQQQQQQQQ NLKKLSGGAT  300
NCSNNATVSS TAQPSASDHN MGCAEQEQLM T
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021719233.11e-119basic leucine zipper 34-like isoform X2
SwissprotQ9M2K48e-82BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A0K9RAZ51e-110A0A0K9RAZ5_SPIOL; Uncharacterized protein
STRINGXP_010675419.11e-105(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-58bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]