PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca51137.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family NAC
Protein Properties Length: 80aa    MW: 9434.61 Da    PI: 6.7791
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca51137.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.21.4e-14659153
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvka 53
                l pGfrF Pt+eel+++yL  k++ +   e+++ i+++diy++eP++Lp +   
  Dca51137.1  6 LLPGFRFYPTEEELIDFYLLTKLRCHYnPEIDRLIPSIDIYNFEPSQLPGNSPV 59
                579********************99983455556**************953322 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.75E-15460IPR003441NAC domain
PROSITE profilePS5100516.986680IPR003441NAC domain
PfamPF023657.8E-7857IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 80 aa     Download sequence    Send to blast
MDSKELLPGF RFYPTEEELI DFYLLTKLRC HYNPEIDRLI PSIDIYNFEP SQLPGNSPVN  60
ASRCTSVTHR RHRNARNPEN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021865979.16e-17LOW QUALITY PROTEIN: NAC domain-containing protein 90-like
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.16e-14NAC domain containing protein 90