PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca51501.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family FAR1
Protein Properties Length: 170aa    MW: 19998.5 Da    PI: 6.9216
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca51501.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR122.43.9e-0788150769
        FAR1   7 AkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvk 69 
                 A e GF ++k+++ ++ +++ e   + f+Cs++g++++  +  +k +++  +++++C+ +++  
  Dca51501.1  88 AFENGFALVKATNGQKnRKQPELLASYFRCSRHGRSKSVYDP-DKPKKKPRTQKCDCDFRVRAV 150
                 7789**9999887655488999*************9999888.555555556667776665543 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MPDADSVTAQ NFVYPWMDNP EFFLPVDGRP ELSHLWLWTK HFIVLPWEDS PDSFEDFRGD  60
DVDYNPLFVT KVCFKDRDEA FDWANNVAFE NGFALVKATN GQKNRKQPEL LASYFRCSRH  120
GRSKSVYDPD KPKKKPRTQK CDCDFRVRAV QNYHSIDNKR VRALEITIMN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130136KPKKKPR
2131137PKKKPRT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-