PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca51714.1
Organism
Dianthus caryophyllus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bZIP
Protein Properties Length: 166aa    MW: 18134 Da    PI: 4.9208
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca51714.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.73.4e-151474363
                XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++++ +r+++NRe+ArrsRqRK++ +++L+  +++L ++N++    +++  +++ + +se+
  Dca51714.1 14 DVRKRKRMISNRESARRSRQRKQQHLDNLTAQIAQLRNQNRQISGSISSTAQQYLSIESEN 74
                56899************************************************99999987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-171276IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.5531477IPR004827Basic-leucine zipper domain
PfamPF001701.3E-111574IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-121668No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-111676No hitNo description
CDDcd147023.43E-211767No hitNo description
PROSITE patternPS0003601934IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MSSTGSEPDV YVADVRKRKR MISNRESARR SRQRKQQHLD NLTAQIAQLR NQNRQISGSI  60
SSTAQQYLSI ESENSILRAQ VDELSNYFCS LNEIVRCLTT TTTAAATAAA TMTATATTSD  120
DSGEGFGGFD LEIDDGFSMD SWGFGLPFGG NNNHCSVVPT IDAFMC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12834RRSRQRK
22835RRSRQRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to specific DNA sequences in target gene promoters. BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000250|UniProtKB:O65683, ECO:0000269|PubMed:29348240}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021714573.11e-47bZIP transcription factor 11-like
RefseqXP_021718066.11e-47bZIP transcription factor 11-like
SwissprotQ9SI153e-30BZIP2_ARATH; bZIP transcription factor 2
TrEMBLA0A445HKP61e-37A0A445HKP6_GLYSO; BZIP transcription factor 44
TrEMBLQ0GPF81e-37Q0GPF8_SOYBN; BZIP transcription factor
STRINGXP_010679785.12e-43(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.16e-32basic leucine-zipper 2
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]