PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dca56261.1

Organism

Dianthus caryophyllus

Taxonomic ID

3570

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus

Family

bZIP

Protein Properties

Length: 298aa MW: 33555.9 Da PI: 8.2464

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dca56261.1	genome	DCA	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.2	6.1e-07	234	272	17	55
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 A+rsR RK+++i+eLe+ v++L+ e ++ el+ l ++ Dca56261.1 234 AQRSRVRKLQYIAELERNVQALQVEGSEVSAELKFLDQQ 272 789***********************9999999988776 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0046	223	282	IPR004827	Basic-leucine zipper domain
CDD	cd14703	2.57E-15	225	273	No hit	No description
SuperFamily	SSF57959	1.13E-5	234	276	No hit	No description
Gene3D	G3DSA:1.20.5.170	9.9E-6	234	277	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence Send to blast
MADAKGSASL TNGRNSLLPP KSPFHSIVTS YTDYVPSTSL GSKSFSKSRD GNVFHQRTSS 60 ESFIEEQPSW LDELLDEPDT PVRKGHRRSS SDSFAYSDAA SMSNIEYAPV SQNENKFRPM 120 VTSPSWVPHN FDHRKEVLQT SLYADTNFYG KHKNGACDSK QAPINHNHAS SLNIRSQGSH 180 AAVDADSFRF SKAEKQDQCE SSSHDPKLSL EKKDGTHANS SSENDTRRAK QQFAQRSRVR 240 KLQYIAELER NVQALQVEGS EVSAELKFLD QQNLILNMEN KALKQRLENL NQEKLIKY

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_021862848.1	1e-136	uncharacterized protein At4g06598
TrEMBL	A0A0K9QWP7	1e-135	A0A0K9QWP7_SPIOL; Uncharacterized protein
STRING	XP_010691351.1	1e-131	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58110.2	2e-63	bZIP family protein