PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dca61332.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Caryophyllaceae; Caryophylleae; Dianthus
Family bHLH
Protein Properties Length: 184aa    MW: 20238.6 Da    PI: 7.5014
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dca61332.1genomeDCAView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.99.9e-0532483955
                TCHHHHHHHHHHHHHHH CS
         HLH 39 sKaeiLekAveYIksLq 55
                +Ka++L +A+eY+ksL+
  Dca61332.1 32 DKASTLDEAIEYLKSLK 48
                8*************995 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474597.72E-63073IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.32E-43252No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MGSDMLMRQA LLRELDVQKL TIDLKGYNFT SDKASTLDEA IEYLKSLKRQ LHIMLTGCGM  60
VPMMHPGPQQ QYMPQTSTSI MPPYTPVVSG PASPATNVIT PRLPVVPIAT TSVVQPSIPA  120
DSTATPYALQ IPGMTQIPNI VADPCQQYFT HQLMQMQMQM QAMQPITSKP TSTKTASDKK  180
EDVQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0K9QKT23e-17A0A0K9QKT2_SPIOL; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59060.41e-08phytochrome interacting factor 3-like 6