PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do000661.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 49aa    MW: 5475.55 Da    PI: 9.4945
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do000661.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM31.45.5e-10140141
         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiyk 41
                lp GfrF+Pt+eel+ +yL++k+ + +l++  +i ++d+ +
  Do000661.1  1 LPIGFRFRPTNEELLLHYLRRKTLACPLPA-GIILDADLAR 40
                799**********************99999.7888888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.24E-12141IPR003441NAC domain
PROSITE profilePS5100514.159149IPR003441NAC domain
PfamPF023652.7E-6224IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 49 aa     Download sequence    Send to blast
LPIGFRFRPT NEELLLHYLR RKTLACPLPA GIILDADLAR LSSLKTPCA
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo000661.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9699706e-43EU969970.1 Zea mays clone 337945 NAC domain-containing protein 68 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971124.18e-18NAC domain-containing protein 83-like isoform X1
TrEMBLA0A1E5VXP82e-26A0A1E5VXP8_9POAL; Uncharacterized protein (Fragment)
STRINGPavir.Eb03721.1.p3e-17(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.17e-13NAC domain containing protein 47