PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do004741.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 220aa    MW: 23868.3 Da    PI: 8.8896
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do004741.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.11.4e-11108160355
                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                 e +r rr+ +NRe+ArrsR RK+ ++ eL+  v  L + N++L +el++    
  Do004741.1 108 EERRRRRMVSNRESARRSRMRKQRQLSELRALVSHLRGANRRLLDELNRALRG 160
                 67899******************************************986555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.5E-8105157No hitNo description
SMARTSM003382.7E-9106170IPR004827Basic-leucine zipper domain
PfamPF001708.6E-9107156IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.243108178IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.3E-9110157No hitNo description
PROSITE patternPS000360113128IPR004827Basic-leucine zipper domain
CDDcd147023.57E-13115159No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MYHHFHGEVA SLGFLSPPNA SFAGHHHMNM ALPPQAYFPP SFEPASAFQD AASLLAGDDG  60
DVASFELDTV VREAAHLAGR NGSPSSGSGS DGAASGYQLN AVAVAAEEER RRRRMVSNRE  120
SARRSRMRKQ RQLSELRALV SHLRGANRRL LDELNRALRG CADARRESAR LRDEKAELAK  180
KFEQLLQAAT ATEKSAASST SNRSCSSEPC NNTSTNNTSE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1122129RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo004741.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9766321e-102EU976632.1 Zea mays clone 985663 bZIP protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025821559.11e-108bZIP transcription factor 2-like
TrEMBLA0A1E5W2V31e-157A0A1E5W2V3_9POAL; Uncharacterized protein
STRINGSi014433m2e-98(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13600.16e-07basic leucine-zipper 58