PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Do006203.1

Organism

Dichanthelium oligosanthes

Taxonomic ID

888268

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

bZIP

Protein Properties

Length: 168aa MW: 19087.4 Da PI: 6.5099

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do006203.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41.3	3.3e-13	78	124	5	51
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 ++ rr+++NRe+ArrsR RK+ ++ L v+eL++ N++L el + Do006203.1 78 RKKRRLASNRESARRSRVRKQRRLNDLSSQVAELQGTNQRLLIELHH 124 68899************************************976654 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.7E-9	74	124	No hit	No description
SMART	SM00338	4.1E-9	74	138	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.565	76	139	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.21E-10	78	128	No hit	No description
Pfam	PF00170	4.8E-10	78	123	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	81	96	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 168 aa Download sequence Send to blast
MQTSKPLHID MQQNCVANLA CLPGLDFTSF FLPQNDPCIY DFNPLDMVGS YNCNGSTTIS 60 SMSAGTADNQ ETCRNDERKK RRLASNRESA RRSRVRKQRR LNDLSSQVAE LQGTNQRLLI 120 ELHHMIAKHA RIVRENDKLR DEAADLQKRL NEMEVEEAEA APETPEVA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	96	RRSRVRK
2	90	97	RRSRVRKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do006203.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_014660928.1	3e-89	basic leucine zipper 8
TrEMBL	A0A1E5UL09	1e-122	A0A1E5UL09_9POAL; Uncharacterized protein
STRING	Si019099m	1e-88	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP12742	27	35