PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do006839.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 145aa    MW: 16092.1 Da    PI: 10.2721
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do006839.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.21e-142785563
                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                ++ +r+ +NRe+ArrsR+RK++++eeL  +v+ L+aeN + + ++ +   e +k++ e+
  Do006839.1 27 RKRKRMLSNRESARRSRARKQQRLEELVAEVARLQAENAQVQTRITTFDRELSKVDGEN 85
                678999**************************************999999998887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.8E-202387IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-122580No hitNo description
PROSITE profilePS5021712.1392588IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.19E-112779No hitNo description
PfamPF001704.4E-112781IPR004827Basic-leucine zipper domain
PROSITE patternPS0003603045IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MSSRRSSSPE SNTDSGSGGG GFPADERKRK RMLSNRESAR RSRARKQQRL EELVAEVARL  60
QAENAQVQTR ITTFDRELSK VDGENAVLRA RHNELAGRLE SLGGVLEVLQ MAGAPVDIPE  120
IPDPLLRPWQ PPFPMQPIAA DAFQF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13946RRSRARKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo006839.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004960384.15e-81bZIP transcription factor 53
TrEMBLA0A1E5V3X34e-99A0A1E5V3X3_9POAL; Uncharacterized protein
STRINGSi023562m2e-80(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP188635100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.16e-28basic region/leucine zipper motif 53