PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Do007934.1

Organism

Dichanthelium oligosanthes

Taxonomic ID

888268

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

bZIP

Protein Properties

Length: 170aa MW: 18211.8 Da PI: 11.6581

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do007934.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.8	4.2e-12	65	111	5	51
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r rrk++NRe+ArrsR+RK+ +eeL+ +++ L a N++L+ +l Do007934.1 65 RRLRRKISNRESARRSRARKQRHLEELRGRAARLRAGNRELAARLRG 111 689**************************************998865 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.4E-8	57	114	No hit	No description
SMART	SM00338	9.2E-10	61	125	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.979	63	126	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	1.1E-8	65	111	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	9.85E-9	65	113	No hit	No description
PROSITE pattern	PS00036	0	68	83	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence Send to blast
MDPLLSDPAL EAFLADIGFG LGPEEEPEPT SPPSVDVTTT TMAAATPPEE ETSASAVAAD 60 ELVERRLRRK ISNRESARRS RARKQRHLEE LRGRAARLRA GNRELAARLR GVQARAALVR 120 LTNARLRAEA GALGRRLAAA RRAIALRQIY AAASAAGGGF ELQALASLIV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	77	84	RRSRARKQ

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do007934.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020169702.1	2e-28	ocs element-binding factor 1-like
Refseq	XP_020183570.1	2e-28	ocs element-binding factor 1-like
TrEMBL	A0A1E5WAE6	1e-109	A0A1E5WAE6_9POAL; Uncharacterized protein
STRING	Si024325m	6e-57	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP15125	19	19