PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do009273.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 148aa    MW: 16259.5 Da    PI: 9.5884
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do009273.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.82.7e-0964109550
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                 +r rr+++NRe+A+rsR+RK+  ++eL+  +++Le  +++L+ + +
  Do009273.1  64 RRLRRRISNRESAQRSRARKQRCLDELRGSAAVLERRRRELAARTQ 109
                 799************************************9998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.7E-860124IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.61162119IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.25E-864117No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-764116No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MAFPDYCMDV HVFQFPAMSP PQLGFGSEEP TASPFPTETL PVASSPEVEA AADALAAECV  60
VDERRLRRRI SNRESAQRSR ARKQRCLDEL RGSAAVLERR RRELAARTQA ARSRLALVRL  120
ANAGLRAEAA ALSRRLADIE QTIASLIG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197102ERRRRE
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo009273.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004986317.12e-29ocs element-binding factor 1
TrEMBLA0A1E5VJF24e-98A0A1E5VJF2_9POAL; Uncharacterized protein
STRINGSi039558m3e-25(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2097457