PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do009834.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ERF
Protein Properties Length: 232aa    MW: 25034.3 Da    PI: 8.1641
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do009834.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP222.82.3e-0771962853
         AP2 28 rkrfslgkfgtaeeAakaaiaarkkl 53
                + r ++g+f t+eeA++a++a+ k++
  Do009834.1 71 KVRRWVGTFATEEEARAAYDAFEKEF 96
                4788******************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510329.21645107IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.4E-66291IPR001471AP2/ERF domain
SuperFamilySSF541714.84E-56397IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    Send to blast
MAAALLQLAH GSAIHAIHSH GDTHTHIRNT SMACLVPTRR RRAGPLRAVP RRVRAPARSV  60
GAAEFRSHRL KVRRWVGTFA TEEEARAAYD AFEKEFLSSP RCGLPASERH GNASGVRRAL  120
HPPDEKRQIV LALTTTRILQ SAAAMQASVS SAPCISSGAM EVAVSSAPWI SFLTSTSAPP  180
TPMSLHSLWA NELADEEDFL GLADLAHLPL PSSDANMDFD PVDSSLFDNG FL
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo009834.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004974648.17e-59dehydration-responsive element-binding protein 1E
TrEMBLA0A1E5W0841e-166A0A1E5W084_9POAL; Uncharacterized protein
STRINGSi015330m3e-58(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP140032023