PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do010216.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family BES1
Protein Properties Length: 176aa    MW: 19100.2 Da    PI: 8.1027
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do010216.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822132.45e-41501622115
      DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpleeaeaagssasaspesslqsslk 99 
                 +s r+pt +ErEnn++RERrRR++aa+iyaGLRa+++y lpk+aD+n+Vl+ALc+eAG+ v+dDG++ r +g      a+   +s++  + ss + +++
  Do010216.1  50 TSLRHPTPRERENNRQRERRRRQVAARIYAGLRAHAGYTLPKHADQNDVLRALCAEAGYHVDDDGNVTRlQGVVDG--AAGPSCSSDHPKPSSHSGTTE 146
                 789******************************************************************4444444..445555555444444455677 PP

      DUF822 100 ssalaspvesysaspk 115
                 + +l+ p ++ +  ++
  Do010216.1 147 AATLQQPEQQEEEEEE 162
                 7777777766665554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.2E-3152153IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MEVGAGREEG EAAAAAMKAV AVVAGRRGCI RSTQGPWTVR RRGRGGGLTT SLRHPTPRER  60
ENNRQRERRR RQVAARIYAG LRAHAGYTLP KHADQNDVLR ALCAEAGYHV DDDGNVTRLQ  120
GVVDGAAGPS CSSDHPKPSS HSGTTEAATL QQPEQQEEEE EEAKLSLELT LSFAYM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A6e-1273118392437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B6e-1273118392437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C6e-1273118392437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D6e-1273118392437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo010216.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9477561e-117EU947756.1 Zea mays clone 356679 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004971713.11e-80protein BZR1 homolog 3-like
TrEMBLA0A1E5VUH41e-125A0A1E5VUH4_9POAL; Uncharacterized protein
STRINGPavir.Eb00361.1.p2e-75(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132013032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.36e-15BES1 family protein