PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do011999.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ZF-HD
Protein Properties Length: 166aa    MW: 17874.6 Da    PI: 8.4883
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do011999.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer32.32.3e-107283758
  ZF-HD_dimer 37 taaalkCaACgCHRnFHRreve 58
                   +alkCaA gCHR+FHR++ +
   Do011999.1  7 GDDALKCAAYGCHRSFHRKDDS 28
                 4689***************976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD1257740.005126IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
PfamPF047703.9E-7326IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domain
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    Send to blast
MSGAGAGDDA LKCAAYGCHR SFHRKDDSQW RHQLLLPAPA PPPPVTPTGP RVPLLLPPPH  60
PYAAAASHLH YALLSPLPRA PAPQFWKEYL HSGGFWTKWC CTCTGMDSGT EEHTGAFLPC  120
LSCRGRTSKG IYTGMDVAVR AVWYYATLPA RALTSGSVLA MDAFGL
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo011999.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-