PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do014545.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 185aa    MW: 19664.2 Da    PI: 11.6193
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do014545.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.63.1e-09135181147
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                 ek+ kr rr   NRe+Ar   +R++a  +eL++kv+ L++eN++ kk
  Do014545.1 135 EKAAKRLRRVLANRESARQTILRRQAVRDELARKVADLSSENETIKK 181
                 799***************************************99885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.6E-6133181No hitNo description
PfamPF001701.1E-7135181IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.45E-5139181No hitNo description
CDDcd147021.98E-8140181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MSDDQQRMRS GGGQRQCRRR GITPEVELGA ALALADMAGS SVGLGPAAER ATARAKVRPA  60
VVQLHTAAGA EEAMTDDDEM AGTRLSLQLG RVGIQSSSSS SAGRTSRQQP TTPAPAAAAT  120
GTQGPRPRHM LTEGEKAAKR LRRVLANRES ARQTILRRQA VRDELARKVA DLSSENETIK  180
KVSQI
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo014545.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025809461.11e-88light-inducible protein CPRF2-like
TrEMBLA0A1E5V5I01e-125A0A1E5V5I0_9POAL; Uncharacterized protein
STRINGPavir.Cb02058.1.p3e-79(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.15e-10bZIP family protein