PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do014583.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 213aa    MW: 23527.2 Da    PI: 9.5156
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do014583.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.31.3e-1185114534
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                 k+ rr+++NReAAr+sR+RKka+i++Le  
  Do014583.1  85 KVIRRLAQNREAARKSRLRKKAYIQQLESS 114
                 789************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-880126No hitNo description
SMARTSM003385.6E-781156IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.87583127IPR004827Basic-leucine zipper domain
PfamPF001709.1E-985118IPR004827Basic-leucine zipper domain
CDDcd147082.17E-2285137No hitNo description
SuperFamilySSF579591.29E-785120No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
PfamPF141441.7E-10165213IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
LDIFPAWPMR SLPTPKEGSN LTADSTEDSE SSSKNNSNHS SDQHGVAANM ASQFDQGSQQ  60
QQQEIQHKNM ATSSTPKTGK TLDPKVIRRL AQNREAARKS RLRKKAYIQQ LESSKLKLAQ  120
MEQDMQRARS QGLFLGGSPG ANTSSGAAMF DAEYARWLDD HGRRMVELHG ALHAHLPDGD  180
LRAIVDDTLT HHDKLFQLKA VAAKSDVFHL ITG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo014583.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025828229.11e-121transcription factor TGAL4-like isoform X1
SwissprotQ53Q703e-98TGAL4_ORYSJ; Transcription factor TGAL4
TrEMBLA0A1E5W8Y41e-156A0A1E5W8Y4_9POAL; Transcription factor TGA6 (Fragment)
STRINGPavir.Ca00148.1.p1e-131(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2537845
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.25e-63bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]
  3. Miyamoto K, et al.
    Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells.
    J. Plant Physiol., 2015. 173: p. 19-27
    [PMID:25462074]