PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do017188.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 416aa    MW: 45883.1 Da    PI: 9.0293
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do017188.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.52.1e-11132161534
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeek 34 
                 k  rr+++NReAAr+sR+RKka+i++Le+ 
  Do017188.1 132 KTLRRLAQNREAARKSRLRKKAYIQQLETS 161
                 788************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.9E-6128183IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.829130173IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-8130172No hitNo description
PfamPF001701.8E-8132161IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.17E-7132166No hitNo description
PROSITE patternPS000360135150IPR004827Basic-leucine zipper domain
PfamPF141444.9E-27217287IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MTASSTMSKE SASYDMAEFD QSAIFLYLDG HDQEQRQTLN IFPSQPMHVA EPFPAKGVSM  60
GMVAAMLPNG NSSSPKRQEQ GGQRSAAPAP GPTVPLPNNS AKETRSSLTK KEATSGGKGA  120
TSGDQERVRD PKTLRRLAQN REAARKSRLR KKAYIQQLET SRIRLSQLEQ QVQVARVQGV  180
FLGTGEQPGF PSAPSPAAVF DMEYGRWVEE HSKLVFQLRA ALNEHLADEQ LQGFVNGAMA  240
QHEELLNLKG AMARADVFHL LSGLWASPTE RCFLWLGGFR PSEVIKVTLK HVEPLSEGQI  300
LGIYNLQQSV QEREEALNHS MEATQQSISD IVAAPDVAPA TFMGHMSLAM NKVASMEGFV  360
MRADGLRQQT LHKLHQILTT RQAARCMVAI ADYFHRLRAL STLWVARPRQ EDGPGL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo017188.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012698770.10.0transcription factor TGAL7 isoform X2
SwissprotQ6H4340.0TGAL7_ORYSJ; Transcription factor TGAL7
TrEMBLA0A1E5WJ130.0A0A1E5WJ13_9POAL; TGACG-sequence-specific DNA-binding protein TGA-2.1
STRINGSi029966m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-139bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]