PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do017799.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family WRKY
Protein Properties Length: 123aa    MW: 14369.5 Da    PI: 10.7112
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do017799.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY28.62.8e-0997117222
                 --SS-EEEEEEE--TT-SS-E CS
        WRKY   2 dDgynWrKYGqKevkgsefpr 22 
                  Dg++WrKYGqK+++g ++pr
  Do017799.1  97 YDGHQWRKYGQKHINGLKHPR 117
                 59******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.6E-981117IPR003657WRKY domain
SuperFamilySSF1182905.62E-890117IPR003657WRKY domain
PfamPF031062.8E-798117IPR003657WRKY domain
PROSITE profilePS508118.61698117IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MRQQQQLLTK LRAIVVPLLP ADDPSAELVV HLLEDVLRCN VNVISQLERG NTYYLLPAVR  60
KSTIHDRNVE QVQKSFNRRR RKNKDISRSL VTDTPHYDGH QWRKYGQKHI NGLKHPRLTD  120
TAL
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo017799.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004980128.13e-28probable WRKY transcription factor 26
RefseqXP_025805423.13e-28probable WRKY transcription factor 46
TrEMBLA0A1E5W6A93e-85A0A1E5W6A9_9POAL; Uncharacterized protein
STRINGSi027876m9e-28(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP133251529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-06WRKY DNA-binding protein 46