PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do019296.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ERF
Protein Properties Length: 31aa    MW: 3286.65 Da    PI: 9.2954
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do019296.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP224.66.4e-081233355
         AP2 33 lgkfgtaeeAakaaiaarkkleg 55
                lg+f+tae Aa+a+++a++ ++g
  Do019296.1  1 LGTFDTAEAAARAYDQAALGFRG 23
                8*****************98887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541715.04E-10131IPR016177DNA-binding domain
PROSITE profilePS5103212.668131IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.7E-14131IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 31 aa     Download sequence    Send to blast
LGTFDTAEAA ARAYDQAALG FRGSRAKLNF P
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo019296.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-