PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Do019456.1

Organism

Dichanthelium oligosanthes

Taxonomic ID

888268

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

EIL

Protein Properties

Length: 491aa MW: 54248.5 Da PI: 5.3211

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do019456.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	171.9	6.7e-53	1	118	7	125
XXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 7 mwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkekvefdrng 105 mwkd+++lkr++er+++l ++++++++k++k+++qa rkkm raQDgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++raWWkekv+fd+ng Do019456.1 1 MWKDKIKLKRIQERQQKLA-MQQSELEKSKTKKISDQALRKKMTRAQDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNIRAWWKEKVKFDKNG 98 9************9976.55556********************************************************************** PP XXXXXXXXXXXXXXXXXXXX CS EIN3 106 paaiskyqaknlilsgessl 125 paai+ky+ +n il+ +++ Do019456.1 99 PAAIAKYEVENSILNITHQS 118 ***********9876665 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04873	3.3E-53	1	118	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 491 aa Download sequence Send to blast
MWKDKIKLKR IQERQQKLAM QQSELEKSKT KKISDQALRK KMTRAQDGIL KYMLKLMEVC 60 NARGFVYGII PDKGKPVSGA SDNIRAWWKE KVKFDKNGPA AIAKYEVENS ILNITHQSTS 120 GDKNDTYSSS DEYDVDRLEQ PPHSTSSKED EGDTQPVLRI RGQQTSTREN KRRRGDKSSR 180 QVVSKEETTK SRQRKRPLDH PPVAEDEVEV TQINDNPPEI VSSAIGDMDI FDPMDVVGMT 240 NQPTSLNHVP TIGSLLQHGD SQGDFLSPGA AINNYNSNQT ASSALNNYNS NQXXXXXXXX 300 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSNYNSNQAA SATQSSTYLS DPPVACEGSD 360 IVNSWSGRSF RQDIAHVPIG FNPSPAVQAS SMQQPVPVPI DHHVPIMGTG ALAGNDSYSH 420 PTVGSGNSGA FASNANQIMD DPFFGEATDK FAGNSLGGLP FSLIPISSPI PSLDDLDDFL 480 DEDNFMQYLG T

Sequence ? help Back to Top

Protein Sequence Length: 491 aa Download sequence Send to blast

MWKDKIKLKR IQERQQKLAM QQSELEKSKT KKISDQALRK KMTRAQDGIL KYMLKLMEVC  60
NARGFVYGII PDKGKPVSGA SDNIRAWWKE KVKFDKNGPA AIAKYEVENS ILNITHQSTS  120
GDKNDTYSSS DEYDVDRLEQ PPHSTSSKED EGDTQPVLRI RGQQTSTREN KRRRGDKSSR  180
QVVSKEETTK SRQRKRPLDH PPVAEDEVEV TQINDNPPEI VSSAIGDMDI FDPMDVVGMT  240
NQPTSLNHVP TIGSLLQHGD SQGDFLSPGA AINNYNSNQT ASSALNNYNS NQXXXXXXXX  300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XSNYNSNQAA SATQSSTYLS DPPVACEGSD  360
IVNSWSGRSF RQDIAHVPIG FNPSPAVQAS SMQQPVPVPI DHHVPIMGTG ALAGNDSYSH  420
PTVGSGNSGA FASNANQIMD DPFFGEATDK FAGNSLGGLP FSLIPISSPI PSLDDLDDFL  480
DEDNFMQYLG T

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do019456.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004973869.1	1e-157	ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBL	A0A3L6RI75	1e-161	A0A3L6RI75_PANMI; ETHYLENE INSENSITIVE 3-like 3 protein
STRING	Si013426m	1e-156	(Setaria italica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3720	37	79

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G73730.1	2e-50	ETHYLENE-INSENSITIVE3-like 3