PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do021387.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bHLH
Protein Properties Length: 88aa    MW: 9836.13 Da    PI: 7.5241
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do021387.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.74.3e-0812531454
                HHHHHHHHHHHCTSCCC....TTS-STCHHHHHHHHHHHHHH CS
         HLH 14 driNsafeeLrellPkas.kapskKlsKaeiLekAveYIksL 54
                d+i + +++L++llP++s ++ +++ s +  L+++++YI+sL
  Do021387.1 12 DEISELISKLQSLLPESSrRGAAGRSSASKLLQETCRYIRSL 53
                6899************555*********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.912153IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-71268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.82E-81273IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.8E-51253IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MSGHRAGRIT DDEISELISK LQSLLPESSR RGAAGRSSAS KLLQETCRYI RSLHREVDDL  60
NNRLSELMAT MDGDSPQADV IRNLLRLL
Functional Description ? help Back to Top
Source Description
UniProtAtypical and probable non DNA-binding bHLH transcription factor that integrates multiple signaling pathways to regulate cell elongation and plant development. {ECO:0000250}.
UniProtAtypical and probable non DNA-binding bHLH transcription that integrates multiple signaling pathways to regulate cell elongation and plant development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo021387.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004983139.12e-50transcription factor ILI3
SwissprotA2XD153e-30ILI3_ORYSI; Transcription factor ILI3
SwissprotQ10R473e-30ILI3_ORYSJ; Transcription factor ILI3
TrEMBLA0A1E5WJJ04e-55A0A1E5WJJ0_9POAL; Transcription factor ILI3
STRINGSi038834m1e-49(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP92838145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.16e-25bHLH family protein