PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do021705.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family ERF
Protein Properties Length: 395aa    MW: 41944.3 Da    PI: 10.365
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do021705.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP229.41.9e-09167216255
         AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +++GVr++  +g W+ eIrd       r +r++  +f +aeeAa+a   a ++++g
  Do021705.1 167 QVRGVRRRL-WGWWATEIRDlQ-----RgRRVWPVTFNSAEEAAAAFNTACLRIRG 216
                 59****877.**********44.....45*****************9998888887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103217.187167224IPR001471AP2/ERF domain
SMARTSM003809.2E-17167230IPR001471AP2/ERF domain
SuperFamilySSF541716.34E-11168224IPR016177DNA-binding domain
CDDcd000184.46E-16169224No hitNo description
Gene3DG3DSA:3.30.730.101.3E-17169224IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
GRAAGQSKTD SSNAAEKGRP YGLYARPGES PNERHSSNAA HPEVQKAKRL RPAASGTFPS  60
APSPPTRLGR YLRLLRRAPA STTSPASSAV PPCPPPPLPP PPWPRLLRLL TAEKKPPPPP  120
AARGLGASCC GRRFLALASP PWSHWTASKD KDEEEDEEEA ATAEGVQVRG VRRRLWGWWA  180
TEIRDLQRGR RVWPVTFNSA EEAAAAFNTA CLRIRGPGAS INLPPPPSAG DTGPLPPHAT  240
SPLPPRPPPP PPAPRALGHC AARRSKEGRQ QRSSRIAGWG LAVAMKGPAA EEHDPLSLGE  300
PIASAQPDER NPYVTDLVTF KWPSAEGFTN LVLTRPAEGT SRSETVGDQE LQGALHKATV  360
SSLDVTLAPI SSSLADLSQS RSGLIASIVV SAPTE
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo021705.1