PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do021829.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family NAC
Protein Properties Length: 148aa    MW: 16626 Da    PI: 9.059
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do021829.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM509.5e-1644141394
         NAM   3 pGfrFhPtdeelvveyLkkk.vegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknra......tksgyWkatgkdkevl 93 
                  G+rF+Pt+eel+ ++L+ k ++  k+++ +++kevd+y+v+ ++ +    ++ +  wy Fs+r +ky++gkr+ r+       + gyWk+  k  +vl
  Do021829.1  44 SGVRFKPTNEELI-FFLRLKhADVLKMPV-DFFKEVDVYHVHXETTKaLXXESLNGYWYVFSPRXRKYKNGKRPARSvfeasgEQVGYWKSNTKLASVL 140
                 6************.677766155566888.99***********99983344445559*******************6577776669****999988887 PP

         NAM  94 s 94 
                 s
  Do021829.1 141 S 141
                 6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.28242148IPR003441NAC domain
SuperFamilySSF1019416.02E-1643140IPR003441NAC domain
PfamPF023651.0E-744135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    Send to blast
MALLCQEQWQ LQSACSNSLG TGDQAAAVVG QEVMMGPYTD TSSSGVRFKP TNEELIFFLR  60
LKHADVLKMP VDFFKEVDVY HVHXETTKAL XXESLNGYWY VFSPRXRKYK NGKRPARSVF  120
EASGEQVGYW KSNTKLASVL SVAKMTAS
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo021829.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1E5UL841e-104A0A1E5UL84_9POAL; Uncharacterized protein
STRINGSi039443m7e-59(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131302130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.14e-14NAC domain containing protein 25