PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Do021881.1

Organism

Dichanthelium oligosanthes

Taxonomic ID

888268

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium

Family

TCP

Protein Properties

Length: 202aa MW: 21131.3 Da PI: 12.4448

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Do021881.1	genome	Dichan	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	77.6	3.6e-24	100	181	7	88
TCP 7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg 88 r ++hTkv+g R +R+ a+ca r+ L++ L + ++++ti WLlqq++pai+++tgt++ + ++ ++ + s+ + Do021881.1 100 RYRDRHTKVEGCRRCIRMAAPCATRVARLTRDLEHRSNGETIRWLLQQSEPAIIAATGTGTVPTIAVPGSNGVLRLPPSRPP 181 778********************************************************66665444222223222222222 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51369	17.207	101	155	IPR017887	Transcription factor TCP subgroup
Pfam	PF03634	8.8E-19	102	163	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence Send to blast
MLSSRRRRAC RTSSSGAAAC RPPARVPLRA VLLPGARLPL LGLAACLLLR SATEAASLPS 60 SPGPRASSSA SPTSPASPCR WSSWAAGSRA PPRAPRPAPR YRDRHTKVEG CRRCIRMAAP 120 CATRVARLTR DLEHRSNGET IRWLLQQSEP AIIAATGTGT VPTIAVPGSN GVLRLPPSRP 180 PRAPTPSSKS SSRPPSAAAS SS

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Do021881.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1E5VRH6	1e-129	A0A1E5VRH6_9POAL; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2864	32	69

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	8e-27	TCP family protein