PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do022005.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 453aa    MW: 47882.9 Da    PI: 8.2511
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do022005.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.53.4e-093383762563
                 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1  25 kaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                 kae+eeL++ v++L+aeN++L++e+ +l++ ++kl+ e+
  Do022005.1 338 KAETEELATQVESLTAENTSLRSEIGRLTESSEKLRLEN 376
                 799********************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF113415.5E-784119IPR021489Protein of unknown function DUF3143
PfamPF077777.9E-17125198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF001702.8E-7338376IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-5338373No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MSMALSSSLR ALALVSPALP SARPSGVAAA PASRLRGRPR RGAGVVALAA ALPSDAQWLE  60
RLPEKKKPLY THSLPCIEAW LRSLGFTQSR EDPAVWVAEM PLWHARLSLD VTDLHIRLAD  120
IREVMAHDEA VATQKTGNTA SPPKDQPAPS PYPDWSTMQA YYGPGVMPPT YFAPAIAPGH  180
PPPYMWGPQV SNPSSVEPTK SANSKEKSSN KKLKEIDRTA VSAGSGNSKR TISSSEDYSA  240
EGSSDVNDQK VNKTSRKRSS VDGSGAETSA AAKMEGVIAP NHTLANTAIL PHHCFPAPVI  300
KPSATNVANS RAMGTTISPS PGVIVPPHTG VPTDLSIKAE TEELATQVES LTAENTSLRS  360
EIGRLTESSE KLRLENSALM VKLKDTATPT PAEPSPNKAA TSSSSPRAAA ENFLSMIDST  420
DASPGVSRHT EHGEPKLRQL LDSNPATDVA AVS
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo022005.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9672141e-150EU967214.1 Zea mays clone 300383 hypothetical protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025807251.10.0common plant regulatory factor 1-like isoform X1
TrEMBLA0A1E5UY910.0A0A1E5UY91_9POAL; Uncharacterized protein
STRINGPavir.Ca00968.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.12e-14G-box binding factor 2