PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do023703.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family bZIP
Protein Properties Length: 244aa    MW: 25776.8 Da    PI: 10.1543
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do023703.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.76.7e-15174215546
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                 +r +r++kNRe+A rsR+RK+a++ eLe+k+ +Le+eN++L+
  Do023703.1 174 QRKKRMIKNRESAARSRARKQAYTNELENKISQLEEENERLR 215
                 799*************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.9E-9170242IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.473172215IPR004827Basic-leucine zipper domain
PfamPF001701.6E-12174215IPR004827Basic-leucine zipper domain
CDDcd147079.28E-19174215No hitNo description
SuperFamilySSF579598.13E-11175216No hitNo description
Gene3DG3DSA:1.20.5.1707.3E-15175215No hitNo description
PROSITE patternPS000360177192IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    Send to blast
MGAKAMSSHG SGVGGGGGAV SRQGSVCSLT FGEADGQLHG VNLDDLLLRA GLKTADEVWR  60
DIQGAAAAAA CPRAQMTLED FLSRAGASAP GDAAGAGARG WAHELYQPAL APRLGHHHHP  120
AVGRPVPRPL GVGAGLVLDA LYHDGHEGGA GAAAVAGRKR AGLERGVSER SNEQRKKRMI  180
KNRESAARSR ARKQAYTNEL ENKISQLEEE NERLRGHKAP EPVVQYVPQQ EPKNQLRRTN  240
SANF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157177RKRAGLERGVSERSNEQRKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo023703.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002465343.21e-120ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A1B6QNJ11e-118A0A1B6QNJ1_SORBI; Uncharacterized protein
STRINGSb01g036810.11e-116(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44413367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.14e-26ABA-responsive element binding protein 3