PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do027770.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family EIL
Protein Properties Length: 538aa    MW: 59039.3 Da    PI: 5.5423
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do027770.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3347.92.1e-106743902302
                 XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX.................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn.................ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkp 83 
                 +lkkrmwkdqmll+rl++r+ +   +++ a g++++                  +++ ++r k+m raQDg++++Mlk+me+cna+GfvYg + e g p
  Do027770.1  74 DLKKRMWKDQMLLMRLEGRSGRDRPHHHDAQGQHQQPgggtghsaqahatcreeTPEARYRHKAMLRAQDGVIRHMLKMMEACNARGFVYGVVGEDGVP 172
                 8******************99877666665555444478888888999999999********************************************* PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS
        EIN3  84 vegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182
                 v+g+sds r+WWk++v f+r gp a+   + +  +++ +s +   + s  h l+++qD+tlgSLLsal+qhc+ppqr+fpl++g++pPWWPtG+e+wwg
  Do027770.1 173 VSGSSDSRRGWWKDDVGFERSGPLALLSAAHQYQAADPGSPM---AASFLHGLHDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLAPPWWPTGHEAWWG 268
                 ***************************998777777766666...88**************************************************** PP

                 HHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..XXXXXXXXXXXXX CS
        EIN3 183 elg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..slrkqspkvtlsc 278
                 ++g ++++qg+ppy+kphdlkkawk+s+L+avikh+sp+++++r+l++qsk+lq+kmsa++  ++++v+ qee++ ++v+   +   l +++++  +++
  Do027770.1 269 TQGeAQAHQGPPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHKMSARDAETWSKVITQEEALDRHVHRALQitPL-EDDEEEAADE 366
                 ***9999**********************************************************************99999654333.3444444455 PP

                 XXXXXXXXXXXXX.XXXXXXXXXX CS
        EIN3 279 eqkedvegkkeskikhvqavktta 302
                 +   d  g++    +hv+++k++ 
  Do027770.1 367 DGGPDDAGDSPLAAAHVNKRKRKV 390
                 555566677777777777777655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.4E-11274341No hitNo description
Gene3DG3DSA:1.10.3180.108.2E-64216349IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.1E-56219343IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MENCESIDYY QKPSHHHHHR HGASKPAMDD DEACAAKDKG KAKADDVDHR AAEPQEPESQ  60
EEFFSDFESI EIADLKKRMW KDQMLLMRLE GRSGRDRPHH HDAQGQHQQP GGGTGHSAQA  120
HATCREETPE ARYRHKAMLR AQDGVIRHML KMMEACNARG FVYGVVGEDG VPVSGSSDSR  180
RGWWKDDVGF ERSGPLALLS AAHQYQAADP GSPMAASFLH GLHDIQDSTL GSLLSALIQH  240
CEPPQRSFPL DRGLAPPWWP TGHEAWWGTQ GEAQAHQGPP PYRKPHDLKK AWKISLLSAV  300
IKHLSPRFDQ MRKLVWQSKR LQHKMSARDA ETWSKVITQE EALDRHVHRA LQITPLEDDE  360
EEAADEDGGP DDAGDSPLAA AHVNKRKRKV GGEGDDTGVD VGKALLALPD IDCVPDADRS  420
AIDELMNLYY QCLQGTDDDG ENEVKVPVAA GDGDGGQHSG VSIAEIPQAA PPVAHDDMLH  480
GWQQHGSGGG AVPQTAAHDA SVVHRDDMLH SLLGVADVVD MSDFPNSPIW QCGGFATD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-472203484131Protein ETHYLENE INSENSITIVE 3
4zds_B1e-472203484131Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo027770.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001142285.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ54e-87EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A1E5W4H90.0A0A1E5W4H9_9POAL; ETHYLENE INSENSITIVE 3-like 5 protein
STRINGGRMZM2G044322_P010.0(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.11e-86EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]