PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do029416.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family EIL
Protein Properties Length: 455aa    MW: 49112 Da    PI: 4.5835
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do029416.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3356.84e-109483102261
                 XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
        EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn............ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 
                 +lk+rmwkdqmll++l++r     +++ + +   +s+            +++ + rrk+m raQDg+L++Mlk+me+cna+GfvYg i+e g+p++g+s
  Do029416.1  48 DLKRRMWKDQMLLNKLEDRAGAFGATAAEGA-GPSSRpppdgllpgeeeTPEVRCRRKAMLRAQDGVLRHMLKMMEACNARGFVYGVIDEAGEPMSGSS 145
                 9*******************99876555533.333447899999999989999********************************************** PP

                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT.- CS
        EIN3  89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelg.l 186
                 d+Lr+WWk+kv+fdr+gp+a+s         +ges l     s  h+l+++qD+tlgS+Lsal+qhc+ppqr+fple+g++pPWWPtG+e+wwg++g +
  Do029416.1 146 DNLRGWWKDKVSFDRAGPMALSGP-------AGESAL--GIASCLHRLQDIQDSTLGSVLSALIQHCEPPQRSFPLERGLAPPWWPTGQEAWWGSQGeV 235
                 **********************99.......344445..246778****************************************************** PP

                 -TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS
        EIN3 187 skdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvs 261
                 +++qg ppy+kphdlkkawk+s+L+avikhmsp+++++r+l++qsk+lq++msak++++++++l+qee +  +++
  Do029416.1 236 QAHQGVPPYRKPHDLKKAWKISLLSAVIKHMSPRFDQMRKLVWQSKRLQQRMSAKDTDTWSKILRQEEVLNCRFK 310
                 *******************************************************************98655444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048736.3E-11548303No hitNo description
Gene3DG3DSA:1.10.3180.102.6E-63178310IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.66E-56181305IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
MEHDVAHGGG GGGGAAVNLG EAFEAALELE QEELSDSESG AESIEISDLK RRMWKDQMLL  60
NKLEDRAGAF GATAAEGAGP SSRPPPDGLL PGEEETPEVR CRRKAMLRAQ DGVLRHMLKM  120
MEACNARGFV YGVIDEAGEP MSGSSDNLRG WWKDKVSFDR AGPMALSGPA GESALGIASC  180
LHRLQDIQDS TLGSVLSALI QHCEPPQRSF PLERGLAPPW WPTGQEAWWG SQGEVQAHQG  240
VPPYRKPHDL KKAWKISLLS AVIKHMSPRF DQMRKLVWQS KRLQQRMSAK DTDTWSKILR  300
QEEVLNCRFK SSLQITPLDD DGGGGDDDDG LEDVVSRAHD KRKRELISTR DNSGSGSGSR  360
SSAGGESGEL AVVLPELAGL VADDSLSPID ELMKLYYSQA PADQGGGHLG NDAAAAVPPV  420
ELDMCGNDIV PPDVLLDLIG SCSGLDDVFR LMQDD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A3e-471793051126Protein ETHYLENE INSENSITIVE 3
4zds_B3e-471793051126Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:30002253}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo029416.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ7269670.0KJ726967.1 Zea mays clone pUT3668 EIL transcription factor (EIL5) gene, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025797229.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
SwissprotQ8W3M02e-88EIL1B_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1b
SwissprotQ9LX161e-88EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A1E5WN310.0A0A1E5WN31_9POAL; ETHYLENE INSENSITIVE 3-like 5 protein
STRINGSi017107m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.12e-88EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]
  3. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]