PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Do029685.1
Organism
Dichanthelium oligosanthes
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Dichantheliinae; Dichanthelium
Family Trihelix
Protein Properties Length: 123aa    MW: 13668.2 Da    PI: 7.5142
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Do029685.1genomeDichanView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix32.52.3e-10831181752
    trihelix  17 meerlrrgklkkplWeevskkmrergferspkqCke 52 
                  e r+++ +lk+plWeevs +m++ g+ rs+k+Cke
  Do029685.1  83 HEGRFQEPRLKGPLWEEVSTRMAAAGYGRSAKRCKE 118
                 6889******************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    Send to blast
MERREQERTA RGETWRRQEA DKFAHEESAR AQSITLPPAA AASGDDMSLD AAAGVGKELV  60
PYDGGDPISR DSLHLSTSQW PKHEGRFQEP RLKGPLWEEV STRMAAAGYG RSAKRCKECA  120
RMP
Cis-element ? help Back to Top
SourceLink
PlantRegMapDo029685.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002453128.14e-41trihelix transcription factor GTL1
TrEMBLA0A1E5VRM23e-84A0A1E5VRM2_9POAL; Uncharacterized protein
STRINGSb04g000520.12e-40(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63993547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-10Trihelix family protein