PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0026s00012.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family MYB_related
Protein Properties Length: 188aa    MW: 20854.5 Da    PI: 9.4024
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0026s00012.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.91.8e-16120164347
                           SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
       Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                           +WT+eE++l++++ +++G+g+W+ Iart+  +Rt+ q+ s+ qky
  Dusal.0026s00012.1.p 120 PWTEEEHKLFLQGLTKFGKGDWRNIARTFVMTRTPTQVASHAQKY 164
                           8*****************************99************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500904.054139IPR017877Myb-like domain
SMARTSM0071736253IPR001005SANT/Myb domain
PROSITE profilePS5129419.249113169IPR017930Myb domain
SuperFamilySSF466895.53E-18115170IPR009057Homeodomain-like
TIGRFAMsTIGR015575.4E-18116167IPR006447Myb domain, plants
SMARTSM007172.2E-11117167IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.605.2E-12117163IPR009057Homeodomain-like
PfamPF002496.7E-13120164IPR001005SANT/Myb domain
CDDcd001677.29E-10120165No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    Send to blast
MKGSNWTFAD SKALEVSLTA HYSKPDRWEH VQTCLPDKSF EDMEAYLHQL EDDIKSIEDG  60
TTPLPPYAPL PHPPQSIKDE SAAAQRLLPA PKKSKTDCTG GSSSAAAAAA AAADRKKGVP  120
WTEEEHKLFL QGLTKFGKGD WRNIARTFVM TRTPTQVASH AQKYFIRLNS QNNKKDKRRA  180
SIHDITH*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00568DAPTransfer from AT5G58900Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ8S9H77e-49DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A2J8AF072e-53A0A2J8AF07_9CHLO; Transcription factor DIVARICATA
STRINGXP_002954068.16e-50(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP3221529
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.12e-46Homeodomain-like transcriptional regulator
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]