PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0033s00001.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family C3H
Protein Properties Length: 503aa    MW: 55967.6 Da    PI: 6.3264
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0033s00001.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.14.7e-06447468425
                           ---SGGGGTS--TTTTT-SS-S CS
               zf-CCCH   4 elCrffartGtCkyGdrCkFaH 25 
                           + C++f   G C+y ++Ck+ H
  Dusal.0033s00001.1.p 447 RYCNNFITKGSCPYNGTCKYLH 468
                           67******************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5115819.49372300IPR004166MHCK/EF2 kinase
SMARTSM008119.0E-1189292IPR004166MHCK/EF2 kinase
SuperFamilySSF561125.61E-2798302IPR011009Protein kinase-like domain
PfamPF028161.1E-26104292IPR004166MHCK/EF2 kinase
PROSITE profilePS501036.38185218IPR000571Zinc finger, CCCH-type
PROSITE profilePS5010311.76443471IPR000571Zinc finger, CCCH-type
SuperFamilySSF902295.49E-5445470IPR000571Zinc finger, CCCH-type
Gene3DG3DSA:4.10.1000.102.5E-4447469IPR000571Zinc finger, CCCH-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006468Biological Processprotein phosphorylation
GO:0004674Molecular Functionprotein serine/threonine kinase activity
GO:0005524Molecular FunctionATP binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    Send to blast
GASTVELADL KSLLAGRALG RKMQAKSRAY KDWFCGPGRP ALERLNKKLE QKPVTDVEVQ  60
RVDEPCSLQD LIESVDNHTP LPPVLDVKSK KPRMHILHDE ILAAGAERSC ILAKSRDQYE  120
TLKVLKRFRQ EGQKAESVNR YLKLLTSHTV AAFLAKEYNN ALDDVGFEGD RLEYVDACVV  180
SFPDPTSNKS CHRFQENFVA GQFCKFSSNC GFNAERTPPA CAAFAHWCYV ATGGRAMVTD  240
VQGWYDVEAR KAYLTDPCVL CSWIGLMDDD YKDRGLVGFE ECLQSHSCND ACERLGLHEA  300
KPVTHALHEI REKIDDKTKQ NAKAAVLRAQ GHADPEGAAS SSNSIRGMTP QEHMQSALRH  360
AQNMETVDEA QEEQEFEPEE GSFVRHDPHP PHRTSFEQTP PVDPPDPPGR RSNPPEPGPS  420
MDSNNTNIGK YDGSQRISST KLGQRDRYCN NFITKGSCPY NGTCKYLHAT KLVQGGQFFA  480
QEAVNMHPCS LEPWRSADTE DA*
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP802722