PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0049s00014.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family C2H2
Protein Properties Length: 143aa    MW: 15043.2 Da    PI: 12.3
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0049s00014.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.80.0001792103213
                           EETTTTEEESSH CS
               zf-C2H2   2 kCpdCgksFsrk 13 
                           +Cp+Cg++F+++
  Dusal.0049s00014.1.p  92 QCPHCGRRFNQQ 103
                           8********776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139133.7E-890112No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 143 aa     Download sequence    Send to blast
MAKQRLQGTE AASLQRAGRP PGTTRPGSRM QSVQPARQPG GAAGGMPKWK AQSEALRQAM  60
AATRQVNSAL ARGESLRNLP PPPSIPDPSF IQCPHCGRRF NQQAAERHIP ACANTIAKPK  120
FLKAGTGGSG AGAPQSRRLP RY*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002946931.17e-33hypothetical protein VOLCADRAFT_87026
TrEMBLA0A250XJ531e-44A0A250XJ53_9CHLO; Uncharacterized protein
STRINGXP_002946931.13e-32(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP778756