PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0126s00012.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family WRKY
Protein Properties Length: 182aa    MW: 19560.6 Da    PI: 9.161
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0126s00012.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY89.33.2e-28103158259
                           --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                  WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                           +Dgy+WrKYG K vkgs +prsYY+C++++Cp++k ver+a  + +v + Y+g+Hnh+
  Dusal.0126s00012.1.p 103 EDGYQWRKYGEKIVKGSVNPRSYYKCSTSTCPARKTVERAA--GAIVATEYKGQHNHQ 158
                           7****************************************..**************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.5E-2693160IPR003657WRKY domain
PROSITE profilePS5081124.22597160IPR003657WRKY domain
SuperFamilySSF1182907.59E-23100160IPR003657WRKY domain
SMARTSM007741.8E-27102159IPR003657WRKY domain
PfamPF031063.4E-23103158IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MDPLHITPLE IRPLEDEASN SLAQTPDSLA QQQKQQASSF FSALFGGGSG GQQQQQQQQG  60
EQAAPPVQPL PLHHEDSTNC QQPTSSATAN STASKVRAAS ANEDGYQWRK YGEKIVKGSV  120
NPRSYYKCST STCPARKTVE RAAGAIVATE YKGQHNHQAP TLKTAKQRKV SGVFLGGWLH  180
T*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A1e-181031601877Probable WRKY transcription factor 4
2lex_A1e-181031601877Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP4691626
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.21e-20WRKY family protein