PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0133s00006.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family ERF
Protein Properties Length: 182aa    MW: 18693.5 Da    PI: 6.5363
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0133s00006.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.72.2e-113401555
                   AP2 15 WvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                          ++AeIrdp     +   r +lg+f+taeeAa+ +++a++ ++g
  Dusal.0133s00006.1.p  3 FAAEIRDP-----HrgCRLWLGTFDTAEEAARSYDQAARDIRG 40
                          79*****6.....337***********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103216.726148IPR001471AP2/ERF domain
PfamPF008474.2E-6240IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.5E-22249IPR001471AP2/ERF domain
SMARTSM003806.1E-16254IPR001471AP2/ERF domain
CDDcd000184.03E-19348No hitNo description
SuperFamilySSF541715.3E-14349IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MQFAAEIRDP HRGCRLWLGT FDTAEEAARS YDQAARDIRG AKAVVNFPSE GEICHFDDGI  60
TGATPPGGSV GSVGLRGGSS LGQGSLSGYG AMRGFAGGSP PPNEGALEMM VKRERLGDDG  120
SEEESTEGPS SKSQRGRGRS AKQIKASAAT TTFEADEAAS GPSGRSSTRP ASSQLQKVGK  180
L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-152502574Ethylene-responsive transcription factor ERF096
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002952426.17e-22hypothetical protein VOLCADRAFT_105483
TrEMBLD8U1482e-20D8U148_VOLCA; Uncharacterized protein
STRINGXP_002952426.13e-21(Volvox carteri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1321540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-20erf domain protein 9