PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0149s00011.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

Nin-like

Protein Properties

Length: 958aa MW: 104236 Da PI: 6.8497

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0149s00011.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	46.1	9.3e-15	122	171	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++ ++dl+ +F ++ +dAA +L v+ LK +CR++G++RWP+Rk+ sl Dusal.0149s00011.1.p 122 NNLCIDDLRPHFFKSREDAALCLRVSINSLKAACRRNGVDRWPYRKLLSL 171 688899****************************************9886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.22	106	192	IPR003035	RWP-RK domain
Pfam	PF02042	1.6E-13	123	171	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 958 aa Download sequence Send to blast
MSTANQLRQS IDAALFSYPL MTSAPETGSG PPDVAAAGVH NSTCVQLTPS QFSSAAVKQE 60 EEEEGGAMRP QQGACVKHEA IVKQEQEEVK QDEGEAAVMD RVPMRMGGTQ ARRPGLDVAN 120 HNNLCIDDLR PHFFKSREDA ALCLRVSINS LKAACRRNGV DRWPYRKLLS LVNLTEAMKG 180 KASEQEQAEM QAELAKVVAN PNHEVNENTV KLKLANYKDR YRRRTKGGRE RINPRCSRSK 240 PRGGKNCGRV QKRTKRKCQP STPSSSHSSD WDCASADPLT RNSSLTAPGW PPHDEDALAA 300 TRFFASSSPD SGSQERGVCH DLSSVDAQPT EHTHARTHFA LNAGYSGVDA TAYITSTSGS 360 TDMRKKGGMA QHQHQQEQQQ QQQQQQQWSR RLREQLGPAR PPGPPSRMSS SQQVMERQGS 420 GLDSCPPVLM SLAPGARAHP HHPQPLANVG AGLITAEQLH PQQDRAAPSR LRATPSARSS 480 STLIATDVAP PLPLQLPQPS QRLAAPLQQQ QGSGSGSDRP APLYYPPPTT QPYLSFDIGA 540 GLGGTDYRNS SSLSPHVDCT GSAAALEYAQ STTGAAMLVG NLSEPQPPPV VGHTHVHLFN 600 VPAAVRGTIQ KQQQQQQQQE PLPRTLLHTQ PAVPRVPPCE GQHQLQQRQP RAPTSQHPWA 660 DHTHRDPIDT TQAVSGAAWP HALPPLAAVS EEETAHACAE TGRGDTQEML PAPASIPTLP 720 LSRGLASVEF HYNDANAGAH ARHGDKGDVD DLGASHPRLG LLSQQLVQQP PPNVHTQQPL 780 QKQEQPQHQQ GQQLPDLGRH SLEHELHSGS NVPFLDLSMF MLQEDKEEGG QSQDCSMPSA 840 MHASAARFTR LSDPRMASPP SVPMDTARIQ SSSFPGNTHS LQNLADLASH HHHHHQQQQQ 900 QREEEGPQQL DDLLEALDGF EEPPGLSDFN SAPLPRLPSF DHDMEGYFDF VVRSGLW*

Sequence ? help Back to Top

Protein Sequence Length: 958 aa Download sequence Send to blast

MSTANQLRQS IDAALFSYPL MTSAPETGSG PPDVAAAGVH NSTCVQLTPS QFSSAAVKQE  60
EEEEGGAMRP QQGACVKHEA IVKQEQEEVK QDEGEAAVMD RVPMRMGGTQ ARRPGLDVAN  120
HNNLCIDDLR PHFFKSREDA ALCLRVSINS LKAACRRNGV DRWPYRKLLS LVNLTEAMKG  180
KASEQEQAEM QAELAKVVAN PNHEVNENTV KLKLANYKDR YRRRTKGGRE RINPRCSRSK  240
PRGGKNCGRV QKRTKRKCQP STPSSSHSSD WDCASADPLT RNSSLTAPGW PPHDEDALAA  300
TRFFASSSPD SGSQERGVCH DLSSVDAQPT EHTHARTHFA LNAGYSGVDA TAYITSTSGS  360
TDMRKKGGMA QHQHQQEQQQ QQQQQQQWSR RLREQLGPAR PPGPPSRMSS SQQVMERQGS  420
GLDSCPPVLM SLAPGARAHP HHPQPLANVG AGLITAEQLH PQQDRAAPSR LRATPSARSS  480
STLIATDVAP PLPLQLPQPS QRLAAPLQQQ QGSGSGSDRP APLYYPPPTT QPYLSFDIGA  540
GLGGTDYRNS SSLSPHVDCT GSAAALEYAQ STTGAAMLVG NLSEPQPPPV VGHTHVHLFN  600
VPAAVRGTIQ KQQQQQQQQE PLPRTLLHTQ PAVPRVPPCE GQHQLQQRQP RAPTSQHPWA  660
DHTHRDPIDT TQAVSGAAWP HALPPLAAVS EEETAHACAE TGRGDTQEML PAPASIPTLP  720
LSRGLASVEF HYNDANAGAH ARHGDKGDVD DLGASHPRLG LLSQQLVQQP PPNVHTQQPL  780
QKQEQPQHQQ GQQLPDLGRH SLEHELHSGS NVPFLDLSMF MLQEDKEEGG QSQDCSMPSA  840
MHASAARFTR LSDPRMASPP SVPMDTARIQ SSSFPGNTHS LQNLADLASH HHHHHQQQQQ  900
QREEEGPQQL DDLLEALDGF EEPPGLSDFN SAPLPRLPSF DHDMEGYFDF VVRSGLW*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38340.1	2e-06	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Dusal.0149s00011.1.p