PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0149s00011.2.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

Nin-like

Protein Properties

Length: 957aa MW: 104164 Da PI: 6.8497

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0149s00011.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	46.1	9.3e-15	122	171	3	52
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++ ++dl+ +F ++ +dAA +L v+ LK +CR++G++RWP+Rk+ sl Dusal.0149s00011.2.p 122 NNLCIDDLRPHFFKSREDAALCLRVSINSLKAACRRNGVDRWPYRKLLSL 171 688899****************************************9886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	14.22	106	192	IPR003035	RWP-RK domain
Pfam	PF02042	1.6E-13	123	171	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence Send to blast
MSTANQLRQS IDAALFSYPL MTSAPETGSG PPDVAAAGVH NSTCVQLTPS QFSSAAVKQE 60 EEEEGGAMRP QQGACVKHEA IVKQEQEEVK QDEGEAAVMD RVPMRMGGTQ ARRPGLDVAN 120 HNNLCIDDLR PHFFKSREDA ALCLRVSINS LKAACRRNGV DRWPYRKLLS LVNLTEAMKG 180 KASEQEQAEM QAELAKVVAN PNHEVNENTV KLKLANYKDR YRRRTKGGRE RINPRCSRSK 240 PRGGKNCGRV QKRTKRKCQP STPSSSHSSD WDCASDPLTR NSSLTAPGWP PHDEDALAAT 300 RFFASSSPDS GSQERGVCHD LSSVDAQPTE HTHARTHFAL NAGYSGVDAT AYITSTSGST 360 DMRKKGGMAQ HQHQQEQQQQ QQQQQQWSRR LREQLGPARP PGPPSRMSSS QQVMERQGSG 420 LDSCPPVLMS LAPGARAHPH HPQPLANVGA GLITAEQLHP QQDRAAPSRL RATPSARSSS 480 TLIATDVAPP LPLQLPQPSQ RLAAPLQQQQ GSGSGSDRPA PLYYPPPTTQ PYLSFDIGAG 540 LGGTDYRNSS SLSPHVDCTG SAAALEYAQS TTGAAMLVGN LSEPQPPPVV GHTHVHLFNV 600 PAAVRGTIQK QQQQQQQQEP LPRTLLHTQP AVPRVPPCEG QHQLQQRQPR APTSQHPWAD 660 HTHRDPIDTT QAVSGAAWPH ALPPLAAVSE EETAHACAET GRGDTQEMLP APASIPTLPL 720 SRGLASVEFH YNDANAGAHA RHGDKGDVDD LGASHPRLGL LSQQLVQQPP PNVHTQQPLQ 780 KQEQPQHQQG QQLPDLGRHS LEHELHSGSN VPFLDLSMFM LQEDKEEGGQ SQDCSMPSAM 840 HASAARFTRL SDPRMASPPS VPMDTARIQS SSFPGNTHSL QNLADLASHH HHHHQQQQQQ 900 REEEGPQQLD DLLEALDGFE EPPGLSDFNS APLPRLPSFD HDMEGYFDFV VRSGLW*

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence Send to blast

MSTANQLRQS IDAALFSYPL MTSAPETGSG PPDVAAAGVH NSTCVQLTPS QFSSAAVKQE  60
EEEEGGAMRP QQGACVKHEA IVKQEQEEVK QDEGEAAVMD RVPMRMGGTQ ARRPGLDVAN  120
HNNLCIDDLR PHFFKSREDA ALCLRVSINS LKAACRRNGV DRWPYRKLLS LVNLTEAMKG  180
KASEQEQAEM QAELAKVVAN PNHEVNENTV KLKLANYKDR YRRRTKGGRE RINPRCSRSK  240
PRGGKNCGRV QKRTKRKCQP STPSSSHSSD WDCASDPLTR NSSLTAPGWP PHDEDALAAT  300
RFFASSSPDS GSQERGVCHD LSSVDAQPTE HTHARTHFAL NAGYSGVDAT AYITSTSGST  360
DMRKKGGMAQ HQHQQEQQQQ QQQQQQWSRR LREQLGPARP PGPPSRMSSS QQVMERQGSG  420
LDSCPPVLMS LAPGARAHPH HPQPLANVGA GLITAEQLHP QQDRAAPSRL RATPSARSSS  480
TLIATDVAPP LPLQLPQPSQ RLAAPLQQQQ GSGSGSDRPA PLYYPPPTTQ PYLSFDIGAG  540
LGGTDYRNSS SLSPHVDCTG SAAALEYAQS TTGAAMLVGN LSEPQPPPVV GHTHVHLFNV  600
PAAVRGTIQK QQQQQQQQEP LPRTLLHTQP AVPRVPPCEG QHQLQQRQPR APTSQHPWAD  660
HTHRDPIDTT QAVSGAAWPH ALPPLAAVSE EETAHACAET GRGDTQEMLP APASIPTLPL  720
SRGLASVEFH YNDANAGAHA RHGDKGDVDD LGASHPRLGL LSQQLVQQPP PNVHTQQPLQ  780
KQEQPQHQQG QQLPDLGRHS LEHELHSGSN VPFLDLSMFM LQEDKEEGGQ SQDCSMPSAM  840
HASAARFTRL SDPRMASPPS VPMDTARIQS SSFPGNTHSL QNLADLASHH HHHHQQQQQQ  900
REEEGPQQLD DLLEALDGFE EPPGLSDFNS APLPRLPSFD HDMEGYFDFV VRSGLW*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38340.1	2e-06	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Dusal.0149s00011.2.p