PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0150s00014.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family AP2
Protein Properties Length: 300aa    MW: 32568.4 Da    PI: 7.254
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0150s00014.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.49.7e-10856154
                   AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54
                          s+y+GV+wd k+  W++e++       +  r ++gk+  +  Aa+a++aa  +++
  Dusal.0150s00014.1.p  8 SQYPGVTWDTKTPGWRVEVYT------CgLRLYVGKYADEATAAAAHDAALWRWR 56
                          78****************666......56**********99********976665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.05E-5859IPR016177DNA-binding domain
PROSITE profilePS5103210.56969IPR001471AP2/ERF domain
PfamPF008474.4E-5957IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.4E-41061IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MKRKSNKSQY PGVTWDTKTP GWRVEVYTCG LRLYVGKYAD EATAAAAHDA ALWRWRGGDS  60
KALENLNNPH LYSNPEQAPP DAETYLSPAA LVRLEACQVE AALRASRSHP KNKVAKRKRP  120
ELSASGDSEG DATISDSKED SDAEANDMLA LDGHLHGSTK EGKLNASKQT TEIMQGSPHT  180
SRPVTQPNPQ GSKQTAENMQ GSFHTSQPVT QPNPQGVLPQ LPQQQPPAEL QSSMAREQRA  240
MENVVKAHSC MQARMADLQA VEQEQQLLQA KAEAARSEVA LAKAAYVQAL QAQLKILAE*