PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Dusal.0157s00007.1.p
Organism
Dunaliella salina
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella
Family ERF
Protein Properties Length: 167aa    MW: 18970.4 Da    PI: 11.0962
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Dusal.0157s00007.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2569.7e-1861110255
                   AP2   2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                           gy+GVr++  +g ++AeIrd       + kr ++g+fgtaeeAa a+++a+ +l+g
  Dusal.0157s00007.1.p  61 GYRGVRQRA-WGTYAAEIRDaK-----HkKRRWIGTFGTAEEAACAYDQAAVELHG 110
                           8*****998.**********44.....45*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.3E-2661124IPR001471AP2/ERF domain
PROSITE profilePS5103219.99461118IPR001471AP2/ERF domain
PfamPF008477.5E-1161110IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-1961120IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.7E-2562118IPR001471AP2/ERF domain
CDDcd000181.51E-2362120No hitNo description
PRINTSPR003673.5E-86273IPR001471AP2/ERF domain
PRINTSPR003673.5E-884100IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042991Biological Processtranscription factor import into nucleus
GO:0048366Biological Processleaf development
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MVFPPLVSSP NFRMSATSSQ SSSGSSISAF AEDISAVRDQ LRVDVPERRF PEEKKHKNRH  60
GYRGVRQRAW GTYAAEIRDA KHKKRRWIGT FGTAEEAACA YDQAAVELHG LHAHTNFEWS  120
KEPDIRTSAF QQQKGRKKRK ALQVRINGPR VFFKALNVFK QTPSHF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-16601171271Ethylene-responsive transcription factor ERF096
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00456DAPTransfer from AT4G27950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027362376.15e-22ethylene-responsive transcription factor ESR2-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP1321540
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.12e-14cytokinin response factor 4