PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Dusal.0165s00008.1.p

Organism

Dunaliella salina

Taxonomic ID

3046

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Dunaliellaceae; Dunaliella

Family

MYB_related

Protein Properties

Length: 1293aa MW: 127656 Da PI: 6.3152

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Dusal.0165s00008.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.9	1.1e-13	42	86	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +W + E+e+++ av ++G + Wk+I +++g +++ q++s+ qk+ Dusal.0165s00008.1.p 42 RTSWLPHEHEKFLTAVSLYGRN-WKKIEEYVG-TKSSVQIRSHAQKH 86 678***************66.*****.**********98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	9.72E-13	36	91	IPR009057	Homeodomain-like
PROSITE profile	PS51294	17.042	39	91	IPR017930	Myb domain
TIGRFAMs	TIGR01557	6.4E-12	41	89	IPR006447	Myb domain, plants
SMART	SM00717	1.3E-11	41	89	IPR001005	SANT/Myb domain
Gene3D	G3DSA:1.10.10.60	7.8E-7	42	87	IPR009057	Homeodomain-like
Pfam	PF00249	3.9E-11	42	86	IPR001005	SANT/Myb domain
CDD	cd00167	2.89E-8	44	87	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1293 aa Download sequence Send to blast
MLAGQPEGDG PSAAAPQPGA TQQQQSNAGK APRKPYCLTR PRTSWLPHEH EKFLTAVSLY 60 GRNWKKIEEY VGTKSSVQIR SHAQKHFAKV ERGDAGTESI AIPPPRYKRK STKPKVEQQL 120 QFEHQQQLET EQEREHKQQW QQAQHQQQSA GGAATLAELD SSSKHSKASA FQASAIQGDA 180 ASPSPTNAAA IASANTEVHA QLQALIANHN AQLLQQQSSQ ASLQSINSNS FTWQPGNFDF 240 HQALSKPAAP GIPTFSNGFW AMQPAPSAPP AVLQPVILQP PPPLINTAAS APPLGPSQPL 300 AQAVSAPPLG MSQPLACTRP LPPPGIVPAA SIASLVVGAD PSDGNAAPVA AATPCGAGSG 360 NMDCKGAGEG SAGMERSNGG AASVATPPPA ADSEPELRGA PATAWSSMET HGSRCTDKAV 420 SPVEGGGGTG VSGTQMRGSW SAAAPDSWGS NAESGGGSAM GSAGEAGARL GSSTSCLTAG 480 GSSQGSGVLR PQARRYHAPH GPGQLAHWAE EQGRERAVGT MLAATSAPPS AAGAAAAAAA 540 AAAAAVANGA QPAAAAATEV RRVKRASSDM GGVRRVPSKS PLQEDEPLGQ SAVGVPPLGT 600 EEEGCKATGA SSGFKPSGSA VAQAQQQELP TASAGAAGGL NSSMLLHNLR RDGAAEWVVG 660 DSALGSLHVQ AVAGSEIPGR APEIPDPAAA AAAAAATGAG ASHGCGSNAP FSNKGAPEVG 720 QSGALPPLAK GTGGRSTGGR SGGQSTDSGG GAGSSGSDSG SQGGHPHRSK LQRRQPKASN 780 SRNGSLDMLR ALSAAHLLQR NRGSSVHPSA VIGSSSSYSM RAPAIRSSPP PPAIADAVAN 840 AANRHGQSGS RTTDALLAAA AAAAAAASAV EPPQGQSPGA SLSLASGPAA AAANPAPVAT 900 SAACQNVAAA PQQPEALPAP HTSGAHTERQ GSNAWALRSG CGSDSKSGGS AGGVSGGDSV 960 AGAAQVNQGG GSMSWGVSRE GSREGDGPGS MGEGEGSRNG SRNSAGCRNA EDGKAGSNAS 1020 GSREGGSGSG GGASCDGGVL SRDERPGAAQ AGVAGSYFSL YVALDRQGRP SANEERMERE 1080 RQQKEQQEAE EGFEPPCGAA AGSALVGPPS AFAPYHAPTH ATPAAIPHAA APPEVVPEDG 1140 SCLLPATEPA AQRQVDAQDN SGTSDGMAEE PGQGAVSDGM AEDQQPPGVA PEENMMEQRH 1200 ACTVEEGGMV PEGARGPLSV GNAGTAEAGA LPVWAQTSTA AAAAAGMAAS AMNEAAAVAV 1260 ADAQASMTAT AAGEATAAAA ANAAVQPTPM QG*

Sequence ? help Back to Top

Protein Sequence Length: 1293 aa Download sequence Send to blast

MLAGQPEGDG PSAAAPQPGA TQQQQSNAGK APRKPYCLTR PRTSWLPHEH EKFLTAVSLY  60
GRNWKKIEEY VGTKSSVQIR SHAQKHFAKV ERGDAGTESI AIPPPRYKRK STKPKVEQQL  120
QFEHQQQLET EQEREHKQQW QQAQHQQQSA GGAATLAELD SSSKHSKASA FQASAIQGDA  180
ASPSPTNAAA IASANTEVHA QLQALIANHN AQLLQQQSSQ ASLQSINSNS FTWQPGNFDF  240
HQALSKPAAP GIPTFSNGFW AMQPAPSAPP AVLQPVILQP PPPLINTAAS APPLGPSQPL  300
AQAVSAPPLG MSQPLACTRP LPPPGIVPAA SIASLVVGAD PSDGNAAPVA AATPCGAGSG  360
NMDCKGAGEG SAGMERSNGG AASVATPPPA ADSEPELRGA PATAWSSMET HGSRCTDKAV  420
SPVEGGGGTG VSGTQMRGSW SAAAPDSWGS NAESGGGSAM GSAGEAGARL GSSTSCLTAG  480
GSSQGSGVLR PQARRYHAPH GPGQLAHWAE EQGRERAVGT MLAATSAPPS AAGAAAAAAA  540
AAAAAVANGA QPAAAAATEV RRVKRASSDM GGVRRVPSKS PLQEDEPLGQ SAVGVPPLGT  600
EEEGCKATGA SSGFKPSGSA VAQAQQQELP TASAGAAGGL NSSMLLHNLR RDGAAEWVVG  660
DSALGSLHVQ AVAGSEIPGR APEIPDPAAA AAAAAATGAG ASHGCGSNAP FSNKGAPEVG  720
QSGALPPLAK GTGGRSTGGR SGGQSTDSGG GAGSSGSDSG SQGGHPHRSK LQRRQPKASN  780
SRNGSLDMLR ALSAAHLLQR NRGSSVHPSA VIGSSSSYSM RAPAIRSSPP PPAIADAVAN  840
AANRHGQSGS RTTDALLAAA AAAAAAASAV EPPQGQSPGA SLSLASGPAA AAANPAPVAT  900
SAACQNVAAA PQQPEALPAP HTSGAHTERQ GSNAWALRSG CGSDSKSGGS AGGVSGGDSV  960
AGAAQVNQGG GSMSWGVSRE GSREGDGPGS MGEGEGSRNG SRNSAGCRNA EDGKAGSNAS  1020
GSREGGSGSG GGASCDGGVL SRDERPGAAQ AGVAGSYFSL YVALDRQGRP SANEERMERE  1080
RQQKEQQEAE EGFEPPCGAA AGSALVGPPS AFAPYHAPTH ATPAAIPHAA APPEVVPEDG  1140
SCLLPATEPA AQRQVDAQDN SGTSDGMAEE PGQGAVSDGM AEDQQPPGVA PEENMMEQRH  1200
ACTVEEGGMV PEGARGPLSV GNAGTAEAGA LPVWAQTSTA AAAAAGMAAS AMNEAAAVAV  1260
ADAQASMTAT AAGEATAAAA ANAAVQPTPM QG*

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP454	14	27

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G09600.2	1e-24	MYB_related family protein

Link Out ? help Back to Top
Phytozome	Dusal.0165s00008.1.p